I hate to tell you this, but I'm afraid Clipboard Manager still stops copying for me. I downloaded the version that you posted here and have it installed OK as far as I can tell (Version 2.0.0.1 in the About properties?)
It was working before I left work last night. I lock my computer by using Windows-L before I leave. I logged in again this morning and I'm afraid that Clipboard Manager wasn't working when I tried it. I use Windows XP SP2 and use Windows Media Player 11. (You mentioned something about Media Player earlier). Media Player is usually minimised to the toolbar as the mini player.
Sorry to be the bearer of bad news, I appreciate the effort to fix it
Regards,
Brian